Pattern matching (Python)

Hello, I have a project that I have to do and so far I have done most of it, but I need the last step and I do not have time. The project is: I have a fasta file with dna sequences and a pattern that match in certain places. I need to reverse complementary sequences and to print the output like:

for every match on the original sequence I need to indicate the start and the end of the match, and if the nucleotide matches the sequence I need to print "." instead of the nucleotide. Else, print the nucleotide.

If the match is on the complementary sequence I need to do the same steps and print the motif under the sequence. Contact me if you think that you can do it. I think that it is not so complicated, but I do not have time to finish it and that's why I need additional help.

Habilidades: Python

Veja mais: python reverse, python end, motif, help python, fasta, pattern matching, reverse python, print pattern, python matching face, gui front end user input output vbs file, project pattern, python script output csv file, pattern project, writing output csv file format python, javascript calendar start end selected, display start date end date bar javascript extjs, net winforms start time end time, python script output text file

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( 3 comentários ) Odense, Bulgaria

ID do Projeto: #6793271

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